mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGGTAGTTTCCTGTTGTTGG GACAGCACGACACTGCCTTCA GCACCTGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTTCAGTTGANATCG CACTGGCGGGCGCAGGTTGCCTAGGGGCTGGGCTGGGCCGGGCCAGGCGCGATGGCAGGGTTCTCTCCTTGGCGGCGGCGGCAGCGGCGGAGGCGGCGGCGGCGGCGGGCGAGGCAGCCCTTCGCGGGCAGCACCTGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTTCAGTTGANATCGTCTCCAGGTACCTCTGCGCCGGGGGGGTCGGGCCGGGCGGGGCATCACGGCCC 3 0 5' arm Homo_sapiens mirnest mir-196 3e-29 oan-mir-196b 3e-35 -34.9 .......((((((..((((((..(((((((.((.(((((((((((...........))))))))))).)).)))))))..)))))).))))))....... (-34.9)