mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTATGCCCTCACCGCTCAGA TGGTGCGGAGAGGGCCCACAGT AGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACGCTGTATGCCCTCACCGCTCAGACCCTGGGGCTGGCTTGG GTCCAGCACGTGGGGTGGTACCCCAGGCCTGGGTCAGACAGGGACATGGCAGGGGACACAGGACAGAGGGGTCCCCAGCTGCCACCTCACCCACCGCAATTCATTTAGTAGCAGGCACAGGGGCAGCTCCGGCACGGCTTTCTCAGGCCTATGCCGGAGCCTCGAGGGCTGGAGAGCGGGAAGACAGGCAGTGCTCGGTGGAGTTGCAGCAGGACGTCACCAGGAGGGCGAAGCGGCCACGGGAGGGGGGCCCCGGGACATTGCGCAGCAAGGAGGCTGCAGGGGCTCGGCCTGCGGGCAGCCGGTCCCACGAGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACGCTGTATGCCCTCACCGCTCAGACCCTGGGGCTGGCTTGGCAGACAGTACAGCATCCAGGGGCAGTCACAGGGCATGGCGGCGAGACCAGACTAGGCGAGGCGGGCGGGGCGGCAGTGAATGAGCTCTCAGGAGGGAGCGATGGTGCAAGGCAGGGCGTGCAGGAGCGCAGCGGGCGGCGAGCGGTGAGGCACCTGGGCTACCAGGAGCCCGTGGGCCACAGGGCGGGCCTCGACGGGCGCGCGACAGGAAGCCGGGAATCGGAGGCCTCAAGCGAGCGGGCCTGGAGACGAAGGCACCAGGTCCTCCAGCTGGAGGTGGGAAGTGCCACAAGTGCCGAAGGGCACAGACGCCAGGGTCGGTGGACAGTGACAAAGAAGAACAGACATGGACCGGTGTG 3 1 3' arm Homo_sapiens mirnest mir-675 2e-20 ppy-mir-675b 2e-45 -53 ((((...((..((((((((((((.((((.((((((..((((((..........))))))..)))))).))))))))))))))))))..)))).. (-53)