mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CATTTTGGGTATATAGTCATA TGACAATCTATTCGATGAG GTTTTCAGGGTTTGACAATCTATTCGATGAGTTCTCGTCATTTTGGGTATATAGTCATAATCACATCA TCTGGACGTATTCCCGGGAATACGGCCGCTACGGCCGGGGACAGTTGTTGATGATCCCAATACCTCATAGCTATATCATCATCTTCCTCAGCTACTGAGTATCAAGTTTTCTGAACCACCTGAAACCACCACCACCACCACCACCAATCCACCATGGCTGATACCAACAAACCTTCAGACCCCAGAGATTTACAGATCGTAGTCGCTGAAAAAGAAGAATCCGGTAACAAAAAACAACAATTATCAATCAAACGAACCTCAAACAAAGACCGCCACACCAAAGTTGGAGGTCGTGGTAGACGCATAAGGATGCCTGCACTTTGCGCCGCTAGAATTTTTCAACTCACTAGAGAATTAGGTCACAAATCTGACGGCGAAACAATCCAGTGGTTGTTACAGCAGGCGGAACCCTCAATCATTGCCGCCACCGGAACCGGTACGATCCCCGCTTCCGCGATGGCAGCAGTAGCTGCAGCTTCACACGGGGTTTCAATTTCAGCCGGATTACAGTTACACCACAAAATTGATGAGCATAGGGTCAACTGGCCTTTAGTTGGTGGGAATTTGGGGGTAATTAGACCCCCAAATCACATGGTCACACCATCGGCGGCGGGTATGACGAGTTTATGGCCTGCCATACCGGTATCAGGATTCGGAATTCAATCATCTTCGTCGTCATCCGGTCCATCTGCTAGCAATTTGGGAACTGAAAACCCCTATTACTTGCAGAGATATCGTTTTCAGGGTTTGACAATCTATTCGATGAGTTCTCGTCATTTTGGGTATATAGTCATAATCACATCAGTCCGGTT 4 2 3' arm Guizotia_abyssinica mirnest 100 100 -11 .......((...((((.((.((((((((((.......)))..))))))).)).))))...))...... (-11)