mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GACTCACTCACAGGATTGTGCA ATGACCCTGGGAGTAGGTGCC CCTCAAATTTAGGGAGGGACTCACTCACAGGATTGTGCAAATGCAAAGTTGGCTTTTCATGACCCTGGGAGTAGGTGCCTCCTTAAATTTTGC ATTCAAGCAATCCTGCCCCAGTTTCCTGAGTAGCTGGGATTACAGTACAGCCTCAAATTTAGGGAGGGACTCACTCACAGGATTGTGCAAATGCAAAGTTGGCTTTTCATGACCCTGGGAGTAGGTGCCTCCTTAAATTTTGCACCCTCAGCAACTCCATCACCTGTCACTTTGCTAGTCCCAACCCTGATGGGAACAAATGCAGGGAAGGCATTCCAGATGGCGGGAACAGCAAGTACAAAAATCCAGAGGCCAGAAAGGCCTGGTGTGTTTCAGGAACAGAAACTCGGCTCCCATGACTGAAATGGAGTAGGGAAATCCTAATG 5 0 5' arm Homo_sapiens mirnest 100 hsa-mir-3680 4e-37 -35.5 ....(((((((((((((.(((.((((.((((.(((((.(((.((.......)).)))))))).)))).)))).))).)))))))))))))... (-35.5)