mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTGTTTGGTTGCTGAGAAAA GGTTTTCTGAAACTGGAGAAGAAA GTTTTGATGTGTCTGTTTGGTTGCTGAGAAAAGGTGGGAAAAGGAAAGTGGTTACGATTTTGTGCTTTTGTTATCTGGGTTTTCTGAAACTGGAGAAGAAAACTTA TTGGCTTGTGGTGACTCAGAAACTGCCCAGTTTGCCTCTGTGGGTGGTGAGTTTTGATGTGATGACTCGGGTTTCATTGAAAAGTTTCCTGTTTGGTTTCTGAGAAAAAGATGGGAAAAGGAAAGCGGTTAGGATTAATTTTGTGTTTTTGTTATCTGTCGATGGGTGGGTGGGTGCCTAGTTTGCCCACGGAAACTGCCTTGTTTGCCTCTGTCGGTGGTGAGTTTTGATGTGTCTGTTTGGTTGCTGAGAAAAGGTGGGAAAAGGAAAGTGGTTACGATTTTGTGCTTTTGTTATCTGGGTTTTCTGAAACTGGAGAAGAAAACTTACTTTCTGAATGGTTTTTATTGGAGACAACTGGATTAGTCTGTGCGGGTTTTCCATTTTCCTTCTGAATTAAAACAATAGAAAACATGACTTACATTT 5 1 5' arm Vitis_vinifera mirnest 100 vvi-MIR3629c 0.0003 -19.5 ........((.(((.(((((((...(((((.((((((.(((((((((.((....)).))))...))))).))))))...)))))...)))))))..)))..))... (-19.5)