mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GCCTGGCTCCCTGAATGCCAT GGCATGAGGGGAGTCAAGCAG TTCGTCTCGGAATATTGTTCTGCCTGGCTCCCTGAATGCCATCTAAGAAGCTTGTTAAAGAGTGTTGACAACCTTCCTATTTGGCATGAGGGGAGTCAAGCAGGCGAAACACATGGTGATC TTTTTTAANNNNNNNCCAGGGAATGGCATACGGCCGGGGGCCTTTTCAATGACAGATAAACCAAAGTTGCCTACCTGCAAAACCCAGGCACTTTGGCTCTATCTATGGAACTATTTGTAAGAAAGAAGCCTTTCCTGCCGCCTTCTCCATGTCCTGTCTTTCTCCTTCCATGGAGTTTCTTCTGTCTTGGGCTCCTCTACTTTTCCTATTTTAACAACTCCTTAAATCCAACTCCTCATTGCTTGTTGCTCTGAACTTTGAAGGAGTGAGAAAGAGAGAGTCCTAGAAAGCTGAAATTGATATATAGACATAAAGAATAAGAAGACTACTGGGATTGAGAGATACAGATCCCCTGCACAAGCAGTTCCCCTGGGTTTCCTCTAGCAAATTACCTGTGCTACTTTCGAACTGAGATGGAGCTTGAGGCTGACTGACTTCTATGATTTCGTCTCGGAATATTGTTCTGCCTGGCTCCCTGAATGCCATCTAAGAAGCTTGTTAAAGAGTGTTGACAACCTTCCTATTTGGCATGAGGGGAGTCAAGCAGGCGAAACACATGGTGATCATGATGTCAAGCTCATTTCCATGGAGGCATCACCTCTTCCAACTGATCAAAATCTGTAATTTTCTTTCCTCTGTTCTTATCATACAGCCAAACACCTTATCCATTTTGCCTTCTCAAATAAACTAAAGGTGTAGCAACAATCAGTAGTCTTAAAAATCCCAAAGAACTGTGACCATTCATTTTCCAATTTATTCTTCAAAGTACATATGTTCTTTTTCTTTTAGCTTTTGGGAAATAAAATATCTTANNNNNNANNNANNNNNNNNNNNNNNNNNNCCTGTCGGCCCGCCTCGGCCCAGTCGACTCTAGACTCGAGCAAGCTTATGCATGCGGCCCCAATTCGAGCTCACTTGCCCAATCCCCCTAAAGTGAGTCGTATTACATTTCACTGGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCAAACTTAAATCGCTTGCAGCAAATCCCCTTTTCGCAGCTGGCGTATAACCAAAAAGCCCCCAACGATCGCCCTTCCAACATTTGCCCACCTGAATTGCCAAGGAAAATGGAAACCTTAAATTTTGGTAAAAATTCCCGTTAAATTTTGTTAAAACACCCCTTTTTAACCAAAGGCCCGAAAACGGAAAATCC 4 0 5' arm Vitis_vinifera mirnest mir-160 0.0000000001 vvi-MIR160b 4e-53 -46.4 ((((((..(((((...)))))((.(((((((((..((((((..((.((((.(((((((......))))))).)))).))..))))))..))))))))).)).)))))).(((...)))... (-46.4)