mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CACGCACGCACACACTCACGT GTGTATGTGTCTGTGTGTGCA GCTCTAGATTCAGCTGGTGTATGTGTATGTGTCTGTGTGTGCAGGTCGAAAACCGGTCGATGAAATCGTTATATACGGTTTGTTTTTTTTTCACTCGTAACACACGCACGCACACACTCACGTACCCACTTGTGTGCGCGTA CCTGCAACAGGTGGCCCGCCACCATGCACCAAATCTCTTCATCTTCGTGCGTTCGCTCGAAATTTTTACGTGGAGAATCGGTTTCTGAAAAGTTAAACTGCACTTTACTAGCGTTCAACACGGAAATGTCCTCTAAAACGCAGTATGCACCTCTATATACGACACCGAAATACGTTTCGTAATACGATTACGATCACTGTACGACGACACGCGCCTTATAGTTGCATACGGTTTTTACGTGCGTCTGTGCTTGCAGTCGGACGGGAAACGATGAAAATGTGATCCGAACACGGTCGATAGACGGACAAACTGGGAGCGGGGGCGAAAAAAGTATCTCGAAATATATCATGCTTTATATACTTGGTGGTGCGCTCGTGTCAAACGAATCGGACGACGACGGCTGTACAGGTATAGAGGTAGGTAGGTAGGTAGGTAGGTATAGTATATTAGAAAACGGTTTCTCTATCGGCCAATAGTGCATTTCGCATTACCATAATATTTAAAACGCGTCGAGCAGGATGCTCTAGATTCAGCTGGTGTATGTGTATGTGTCTGTGTGTGCAGGTCGAAAACCGGTCGATGAAATCGTTATATACGGTTTGTTTTTTTTTCACTCGTAACACACGCACGCACACACTCACGTACCCACTTGTGTGCGCGTATTATTTTTTTTAACTTCCAGTTCGATAATATACGGTTTTCTCGCTAACC 3 0 3' arm Acyrthosiphon_pisum mirnest 100 100 -38.4 ((........(((.(((.(((((((..(((((.((((((((...(((((((((((....((((.....))))...)))))).............)))..)).)))))))).)))))..)))))))))).)))...))..... (-38.4)