mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTCAAAAGATTCGTCTCGCAA GGTGACGAATGTTTTGTAGA TACATTTGATTTGGTGACGAATGTTTTGTAGATGGATGATACAATATATCATACTGTAGCACTTTTGTTTGTATTTGATAAACATTGTCTAATCATAGATCAACTAGACTCAAAAGATTCGTCTCGCAAATTACAGGC TGAAGAGGTACAGCGAAGATGACATGGCCTACAAGATGTTCTCACGTGCAAAGCTGGATGATGGTTTACTGGATCAGATATTCAGCAAGAGGAAAGAGACGATCCGGATAAACTGGGCTGCTTACCCGCACTACCAAGCCCCCGAAGAGTTTGCTCCGATAGTGCTGGACGGGAAGCAGCTGTACTACGTGAACACCTTTGAGAGCGCGGCGAGCCCCATAGAGACGGGTGCCGTGGCAGCAGAGAATGTGGCACGGCTCATCATTTCGAGGCGTTCTCTACCGCAGCGAGGAGTGGAGCCTGATGCTCCTCATATCAAGCCATTCGCGGAGCAGGAGGAAGAAGGATCCCAGCGTCGGCATGTAGACCTGTGATTCTGTGAAGCTGGGCTGGGATGTGCCTGTCCCTGTGAAACTTTGTATAGATTTTAGCTGGGCACTCTAGGCGCAACAGATGCATTATGTGTGGAGCTGTGGCACTCTGGCTTTTAGCTGTGTTGATTGAGTTGTACTCGACTACTATTACTTGAGTGTCTGCTGTTGAGTTGCAGCGGCATTTTGGTACATTTGATTTGGTGACGAATGTTTTGTAGATGGATGATACAATATATCATACTGTAGCACTTTTGTTTGTATTTGATAAACATTGTCTAATCATAGATCAACTAGACTCAAAAGATTCGTCTCGCAAATTACAGGCAAACTGTGTAATTAGTTATTATTTTTATCGGTATTTAATGTTTCATGTATGTACTGC 5 1 3' arm Sorghum_bicolor mirnest 100 osa-MIR2124e 0.0000001 -27.6 ......(((((((..(((((((.(((((....(((.((((....(((.........(((.((...(((((((.....)))))))..)))))...))).)))).)))....))))).)))))))...)))))))..... (-27.6)