mature_miRNA	miRNA*	pre-miRNA	EST_contig	mismatches	bulges	arm	species	source_database	RFAM_best_hit	RFAM_lowest_evalue	miRBase_best_hit	miRBase_lowest_evalue	folding_energy	secondary_structure
TCATCATCATCGTCATCTTGC AAGATGGAGCGATACTGGTCAGG ATCATCATCATCATCATCATCGTCATCTTGCGTTCTTCTAAATCCATTCAATTTCACGGGGAATTATCTGTTTCGTAAGATGGAGCGATACTGGTCAGGAAGTAGT GGCGGACTCAGTGGTAGCGTACACCTTCCGCCATTTCCCCCCTTTAATGCACCGTTGTTCACTCCCCTTGTTCTGCCTCAACCGTCATCCTCTGCTACCTTCACCATCCACCCTTCTCTTCAAAACCTCATCATCATCATCATCATCATCATCGTCATCTTGCGTTCTTCTAAATCCATTCAATTTCACGGGGAATTATCTGTTTCGTAAGATGGAGCGATACTGGTCAGGAAGTAGTGTCAACAAGAACAAAGGCATGGTGGAGCATTTGCAACGTTACGGAGTCATTCAGTCTAAAAAAGTGGCTGAAGTAATGGAGACTGTTGATCGGGCGTTGTTTGTACCCGATGGATCCCTAGCCTATGAAGACAGTCCCATGTCAATAGGTTATAATGCCACAATTTCTGCACCTCATATGCATGCTACTTGTCTTCAGCTATTGGAGAAACACTTACAGCCCGGGATGCATGCTTTAGATGTTGGTTCAGGAACGGGGTACTTGACGGCATGTTTTGCACTTATGGTTGGCCCACAGGGGCGCACAATTGGCGTTGAGCATATTCCCGAGCTGGTTGCAATGTCTCTTAAGAATGTTGAAAAAAGTGCAGCTGCTCCATTACTCAAAGATGGATCTCTTGCCTTACATGTTGGTGATGGCAGAGAAGGGTGGCCAGAGTTTGCTCCTTATGATGCTATTCATGTTGGGGCAGCGGCTCCGGAAATTCCAAAGCCACTTATAGAACAGTTGAAACCAGGGGGAAGGTTGGTTATACCAGTCGGTAACATATTTCAGGAACTGAAAGTTGTTGACAAAAACGAAGATGGTTCTGTGACTGTTCGTACCGAGACTTCAGTACGTTA 4 2 5' arm Helianthus_ciliaris mirnest  100  100 -18.9 .......((...((((..((((((((((((((......(((.(((..............))).))).......)))))))))..)))))..))))...))...... (-18.9)