mature_miRNA	miRNA*	pre-miRNA	EST_contig	mismatches	bulges	arm	species	source_database	RFAM_best_hit	RFAM_lowest_evalue	miRBase_best_hit	miRBase_lowest_evalue	folding_energy	secondary_structure
CCTCCCTTCTCTCTCTGTCTA GGCAAGGAAGGAGGCCGAAAAT TTGTGGTCCGTGGGCAAGGAAGGAGGCCGAAAATTGCATCAATGCCCCTCCCTTCTCTCTCTGTCTATACCCCCTC TGATGGTGCAAAGAAGATTCCTGTTCCCCCTTTTAGATCACCTTTGTGCATGCCTTTTCTTGTGGTCCGTGGGCAAGGAAGGAGGCCGAAAATTGCATCAATGCCCCTCCCTTCTCTCTCTGTCTATACCCCCTCATACTGCATCACGATCAAGAGCATGTATGCAAGTTGGTCTTTCTAGGGATGGCGAACTGACCGGCGATTTTCTGGTTATTCGTCCTGCAGGACATGGCGGACGCCGTCGACCGCTTGAAGACCGGGTTCAACAAGTTCAAGACCGAGGTCTATGACAAGAAGCCGGAGCTGTTCGAGCCTCTCAAGGCCGGCCAGTCCCCCAAGTACATGGTGTTTGCGTGCTCCGACTCCCGTGTGTGCCCGTCGGTGACCCTGGGTCTGCAGCCCGGTGAGGCCTTCACCGTCCGCAACATCGCCGCCATGGTCCCAGCCTACGACAAGACCAAGTACACCGGCATTGGGTCTGCCATTGAGTACGCCGTGTGCGCCCTCAAGGTGCAGGTCCTCGTCGTCATTGGCCACAGCTGCTGTGGTGGCATCAGGGCGCTCCTCTCCCTCCAGGATGGCGCACCTGACACCTTCCACTTCGTTGAGGACTGGGTCAGGATCGGCTTCCCTGCCAAGATCAAGGTGAAGAAAGAGCACGCTTCGGTGCCGTTCGATGACCAGTGTTCCATCCTGGAGAAGGAGGCCGTGAACGTGTCCCTCGACAACCTCAAGACGTACCCCTTCGTCAAGGAAGGGCTGGCCAACGGGACCCTCAGGCTGGTCGGCGGCCACTACAACTTCGTGTCAGGGGAGTTCGACACATGGGAAATTAAGAGCTAAGCTGCCCGGCCGGCCGCTTAACAACTCCTACCATCATCATAAATATATATACTACATACCTACCGATATGCACCCGATCGATGTGAATGCGTGGAGTATTACTCATGTTTTCTGCATGCAGCGACATATATATATATATACCGGATCGCCCAATGTGAATGTAATAAGTAATAGCATTTTCTACCGCTTTTATTTCTAACGCCGAGCTTTCATGTACTATATAATGTGTTATATGATGAGTAATTTGACCGCCCTGTGGTCAAAAGACATCAGCTATAATCCTTTTTTCGCAATATTTATTATGAAGCGTTTACCTCTTGTACTGCCTTT 5 1 3' arm Sorghum_bicolor mirnest  100  100 -17.8 ....(((..(((((((.(((.(((((..((.....(((....)))...)).))))).))).))))))))))..... (-17.8)