mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCATCATCATCTTCTTCT ATGACGACGACGATGACGATG TTATAATAGATGACGACGACGATGACGATGAAGATGAATATGACGGAGGAGAGAATGCTGATGTTGTTGGAAAAGCGCTGCACAAGTGCGCTCAAATATCTGCTCAACTACGGAGTGACCTCTACGGTTCATCATCATCATCATCATCATCTTCTTCTGCTCAT TTCATCTTCATCTTCCTCCGTTACCATCCAATGCCGCCACTGTTAGAGTCAAACTCAATATCCGACGAGGAGTGGTCCACTCACGACTTCGATTCCTCCCGAATCCTCACCAAACCACCACCCTCCTCCTCTGCTTCCAAAGCACCACCGTCAATCGAGTCTTTCGCTTTCAGAGCCCGAACCTCTACTTCCTCCGACTCCTCTGACTGTGTCGAAATCATCCACCACCAGCCGCAGCACGAGGAGGTTTTGGAGGACGATGACTTTGAACAGCCTCCCTCCCCCACAATGGCCCGCTTATACCGGAGGTTTATAATAGATGACGACGACGATGACGATGAAGATGAATATGACGGAGGAGAGAATGCTGATGTTGTTGGAAAAGCGCTGCACAAGTGCGCTCAAATATCTGCTCAACTACGGAGTGACCTCTACGGTTCATCATCATCATCATCATCATCTTCTTCTGCTCATGCCCATGCTGAAGTTGACGCTTCCTCTCTCAGAATCGTCACTCATGATGATATATGTGAAGCATGTGGATCTGGGGATTCTGGATTTCAACCTCTTCTTAAACCCTACCAGCTTGTTGGTGTCAATTTCCTCATGCTTTTGTACAGGAAGAAAGTTGCAGGAACAATATTGGCAGATGAGATGGGACTTGGTAAGACTATTCAGGCGATAACATATCTTACTCTG 5 0 3' arm Helianthus_ciliaris mirnest mir-598 0.0006 ath-MIR414 0.000008 -47.8 ......((((.((.((.((.(((((.(((((.(((((((.....(((((.(((......((((((....((...(((((.....)))))..)).))))))..))).(((....)))..)))))...))))))).))))).))))).)).)).)).))))..... (-47.8)