mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGTCCGTGGTGGTGGGCGAAT TCGAACAGCGCCATCGACGTG CGTCAACCATGCGTCCGTGGTGGTGGGCGAATTCATCTACTCCTTCGGTGGATACTGCACCGGGGAGGACTACCATTCGAACAGCGCCATCGACGTGCACGTGCT CCCACGCGTCCGCGAAATTGTGAAACACACCGTGCTGTTCACGCCCAGCAGTAAACGCTGAAGCTGCTTTCGGTTTCGTCCGCCGTACGGCCCAAGGACGGGGCCCCGTTTCGGACCCTCCCCCGTGTGTGTGCACCCGAGTGTGCGTATTCAGCGGAAGGAAGGAAGAAGAAGGAGCAAAATCTGCAAATGCAAAACAAGGCAAATTAGGAAACCACGTATTGCATCGCGATCGTCTTCCTGTCATCCTGTCCTACCTTGGAAGGAGGAATCGTGTGTGGCAGTGTGAAAACTGTTTGTGTTTTGCTACGGGAAGCTGTATCGCTGTAGTTGGATTAAATATCGTGCCCGACCACCTTCCTCCCCACTCCCCTGGGGGTGACGGTCTCATGGTTTGCATAATATGAACGCAATGTGTGGTGGCTGTGTGTTGTGTTCGTGCATGGCGTGCAGTTGCTGTGAGCAAAATTGAGAGCTAATCAAAACATCGAAAAATACACAAAACCCTCCCCGTCCCCCCCGATCGTCCGGACCTCCATCATGCACTGGGTCGTCAATCTGGACGGTGGGCCGCGGCGCGTCAACCATGCGTCCGTGGTGGTGGGCGAATTCATCTACTCCTTCGGTGGATACTGCACCGGGGAGGACTACCATTCGAACAGCGCCATCGACGTGCACGTGCTGAA 4 0 5' arm Anopheles_gambiae mirnest 100 100 -34.7 ..........(((((.((((((.((..(((((.......(((((.(((((.......)))))))))).......)))))..)).)))))).)))))((....)). (-34.7)