mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGTGTGCATGTGTATGTGTGA GCGCATATACTGATCCACGTT GTCCGTGTGCATGTGTATGTGTGAGAGAACTAGGTGTGTCTAGCCGCGCATATACTGATCCACGTT GTCCGTGTGCATGTGTATGTGTGAGAGAACTAGGTGTGTCTAGCCGCGCATATACTGATCCACGTTCTAAGCTAGGAGTTTCAGTTTAAACATTATTGGGAAGAATCGTTTTTTTCTGTCAGATTTGTTTGTACCTCACACGCGCGTGACGGAAGAGAAGGGTGTGTGTAGTGTAGGGAGTTTTTTTTTTTAAATTAACTTTCAACCGCCCCCCCCCCCAGCTGTGTGCATCTCGAGTTGTCTCATTGATGATGGGCCCCAGTGGGTGGGAAGGTGGAACGTTGTGGTGGACAATTTTGCAATTTTAAAATCTGCAACCAGACTTCAATGAAGATGTTTTTTATTTAACGATTCCTACCCCAATCTCTGTTGCACGTTTTCTCATTGAAAGACGGGGTAGGATCTGCTGTTTCCCCAAGTGGGTGTAATTCGCGTAAATATTGATGTTTTTTTTCTTTCTCTGCAAAAATTTAAATCGAAACAGCAGACCCCTAAAGAATGTGTGTCTTTTCTGGNTGCATTGTAGCTAACTCAATTCCCGCGTCAATGTTAGAAGAAAAAGTAGTAAGACGAACCGTGCGCCCCATTTTGTTTTTCTTGTCATCAACAAGTAATAATTTTGGCTTGCAAATGTGTTCGAACGTAANATCACAATTACATACACTCGATTTTTGTGCTCCCCCTGACCACCAATNCCCCCTCCTNTC 3 2 5' arm Anopheles_gambiae mirnest 100 100 -17.8 ...((((..((.(((((((((((..(((..........)))...)))))))))))))...)))).. (-17.8)