mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGTTTGTTTGGTTTTGTTTTT AGACAGGACTATCCACGAAGGGG CACAAAATACTCGTTTGTTTGGTTTTGTTTTTTGTTTTTAAGGACAACGATAAAGACAGGACTATCCACGAAGGGGCAGAGGTT GGAAGATGTTAGAGGAAGCTTTCTTTCTTTCGCCAGTAAGAGCGGATTCTTTTAGCTGCTGGGAGGAAAAAAAAGGGTCAAACCACAGTTGTAACCGACTGCTGTACGCGTTGCCAAACATTTACGGTGGGAAATTTCGATTTGAAATCCCAACCGGGTAAAACAGAACTTTTCGGAGTTGCTTTCAAGGGAGTTTTTGTGTGTTTTTAAAAGTTGCTTTCACCCCACAAAATACTCGTTTGTTTGGTTTTGTTTTTTGTTTTTAAGGACAACGATAAAGACAGGACTATCCACGAAGGGGCAGAGGTTACATTTAGTTGGAGAAGATCAAGAAATCATGCAATAAGAGGGGGACGACGAACACACAATTAACCTTTTTACTCTCTCTCTCTCTCTTTATGAAAGCTGCACGGATCATTCCCGAATGGTCGTTTTTGTGTTTAGTGTTTTATTTTTCGCGTTTTTTTTTTTGCGTGGAGTTCACTCCAGATGTGATGATGGACCAGAGTGAAACGACCATTTTCTGTCATCGGCTTAGTGCAGGAGTCGATGATGAGCACGTGCCCTCCCACCAATGC 2 2 5' arm Anopheles_gambiae mirnest 100 100 -17.9 .........(((.(((((.(((((((((((((.(((.((...)).)))...)))))))))))))...))))).)))........ (-17.9)