mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTTATATATGTGTGTGTGTG CGCATTTACAAATACAACGTG TAAACTGCGACTGTTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGAAAAGAAGAAAAAAAACAAAGAAACGAATAGACTTCAACCATCTGCTGAAAGGTGATATAGCAATCGGAAAGCACGCGTCTCCTCACATAGCATGTACACGCATTTACAAATACAACGTGCGAGAAAA TTTTTTTTTTTTTTTTTGTAAACCGAGTGATTACATGAAAATATATTTCTAGACACCTTATTTCGTATTTCCCATGACAGTAAAACATTAACGCAATAAAAGAGAATAAAAATACAGAAAAACTATACGTAAAACGAAAAAATGCACTCATCCTCGTCTGCGAAAGTTGTGTACGATCAAAAGTATTATTAAGTGACAACTATTAAAGATCAACCGAAGTCCACTGTATAACAGGCGTGGACTTGACAGCACGGAGAAAATATTATACGATGACACAAGCCTTAATGCTCAAATTACATGTCTAACGCTCACATCCACTGTTGATTGTTAACATAGTGCATACACCTTCGTGACACAGATATTCCGTTTCATAATCATCATCGTCATTATCATGCGAAGCTCCTGCGAAGCCCACCGTCAATTTCATTCAATAAAATGCTATCCCCAACAATTTCATCTTACAAAATTTGCATACACGCACGTTATAAAAAGCTACGTAATTATCATTAAAATCTGGTAATCTATCATCATCGAATAATAATGGCTTAACCATCTAAACTGCGACTGTTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGAAAAGAAGAAAAAAAACAAAGAAACGAATAGACTTCAACCATCTGCTGAAAGGTGATATAGCAATCGGAAAGCACGCGTCTCCTCACATAGCATGTACACGCATTTACAAATACAACGTGCGAGAAAAAATCCTTGCAACATAAAATTTCCTCCCCGTCCCATATAATATA 4 0 5' arm Nasonia_vitripennis mirnest 100 100 -37 .....((((...(((.(((.((((.(((((((((((((((.((((((.((((...((((........................)))).......(((((..........))))).))))...)))))).......)))))).....))))))))).)))).))).))).))))...... (-37)