mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCTTCATCATCATCATCT ACGTTGATGATGAAAATGGCT TACAGGAGGAGGGACGTTGATGATGAAAATGGCTTTACGGTCCTTAGCTTCTAAAGCGGTTCGATCATCTTCATCATCATCATCTAGGGTTTTAT CGGGGGTCAGGCTAGAAGAGGAAGGCTTTGGTAATTTAAAAAACTCTAGTTTTACAGGAGGAGGGACGTTGATGATGAAAATGGCTTTACGGTCCTTAGCTTCTAAAGCGGTTCGATCATCTTCATCATCATCATCTAGGGTTTTATCAACAAACACTTGATACAATCTCATTAAATCCATCCATTCTACACCTGCAACTAGACCTAGGGTTCCTATTGCACATCATGATCGCTTATTTATGCCTCCTCCTCTTCACAACTCGGAGGAGACTTCACTTGCCTCTACCCTAGCGGCATTACTTCCAGCCCTATGCTTTGGATTAAGTTTGACCCCTGTCTTGGCTGACGATGCATCCACTGAAGTAACTACAACTGATTCGATTGGTTTACAGAAAATTGAGGATGGGTCAGTAGTATCAAACATACATACATCCAAGTGGAGGGTGTTCACCGACAGCGGAAGGGATTTGTTTTTTCAGGGTAAATTGGAGGATACCGAGAGGTTGTTTATTGGTGCACTGGAAGAAGCTAGGCAAGGGTTTGGGGAAAGAGATCCTCATGTTGCCTCTGCATGTAACAACCTGGCTGAGTTGTATAGAGTTAAGAAGGCATTTGATAAAGCAGAACCGTTGTACTTGGAGGCAATTAATATTCTTGAGGAATCATATGGACCTGAAGACATAAGGGTTGGGGCTGCGCTTCATAATCTAGGACAATTTTATCTTGTCCAAAAAAAAATTGGATGGCGCTAGTGCTTGCTATGAGCGTGCTCTAAAGATAAAGAGGCGAGTTTTGGGAGAAGCTCATGCTGACTACGCTGAGACCATGTATCATCTAGGCAAGGTGCTACACCTTCAAGGGAAAAGGGAAGGATGCCGAAGCCCTCATAAAGATTCTATTCGGATACTTGA 4 0 3' arm Helianthus_petiolaris mirnest mir-598 0.0003 100 -22.2 .......(((..((...((((((((((.((((.....(((.((...((((...)))))).))).)))).)))))))))))).))).......... (-22.2)