mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGGCTCGGCTCGGCTCGGCTC AGCTGTCCCCTGCCGGAGCTGTC TGCCGGAGCTGTCACCTGCCGGAGCTGTCCCCTGCCGGAGCTGTCCCCTGCAGGCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCT CAGGCCTTCAACAACCACGGCTGCAGTGGGGGCCTGCCGAGCCAAGCCTTCGAGTACATCCTGTACAACAGAGGGCTCATGGGGGAGGACAGCTACCCGTACCGGGCCAAGAACGGCACCTGCAGGTTCCAGCCGGACAAGGCCATTGCCTTTGTCAAGGACGTGATCAATATCACACAGTATGATGAGGATGGCATGGTGGAAGCTGTGGGGAGGCACAACCCAGTGAGCTTTGCCTTTGAGGTGACCAGTGACTTCATGCACTACAGGAAAGGAGTGTATTCCAACCCCCGCTGCGAGCACAGCCCTGACAAGGTGAACCACGCCGTGCTGGCCGTGGGCTACGGACAGGAGGATGGCACTCCCTACTGGATCGTCAAGAACTCCTGGGGCCGCCTGTGGGGCATGCAGGGGTATTTCCTTATTGAACGAGGCAAGAACATGTGTGGGCTGGCCGCCTGTGCCTCCTACCCCGTTCCCCAGGTGTAGCACAGCGCAGGGGGACGGGGCTGGAGCGACTGAGGGGCTGAGTGCCGGCAGGAGGGGACAGAGGGAGCTGCCACGCTGTCCCCTGCCGGAGCTGTCACCTGCCGGAGCTGTCCCCTGCCGGAGCTGTCCCCTGCAGGCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGCACAGCCCTGCTGCAGCAGCACACCCTGTACCTGCCCTCTGTGACCGAACCCGGGTGCTCCTGTGCCCCTGCCGTGTCCCGCCAGGTGTGCCAGGTGTGCCAGGTGTGCCTCCGTGCCCTGCCNNNCCGGGACACCCCACGGCATCCGATCCGCAC 4 2 3' arm Taeniopygia_guttata mirnest 100 100 -46.4 .((((.(((((...((.((((.(((((..((..((((.(((((((.......)))))))))))..))..)))))))))..))..))))))))). (-46.4)