mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGAGGTGCCGATCGACACCGC GGCAGTCGCATCGGCGCCTGGCG AGCGACTTCGAGGAGGTGCCGATCGACACCGCTGACGGAGGCGGCGGCAGTCGCATCGGCGCCTGGCGTTCAGCGG CCCGGGCAGCTTCAGCTTCGGGGCCGTCGGCGGCGGCTTCAACGTCCGCGGCAGCTGCGAGGCCTTGAACTATCGCTCGGCATATTACACCACCGCCCCGCCTGCGCCGCCAACCATTCAGTCGATGCAGACGCACGAGGCTCCGCCACCGCCGCAGCAGCCGCAGCCGCCGCCGGGCCTCCTGTGCGTGAGCAACGTGGCGAGCATCCAGGACGAGCCGCAGCAGGCGCCAGCTGCAGAGGATGAAGCCGCTTCTTCTAGGGGCAACAGCCGACTCGTCAGCCAGGTGTTCAGCGACTTCACCGAAGACGAGGAGAGTGACGGGGGCGGAGGTGACGGCAGTGGACCTGGGCGACGCTCGGAGAGTCCCGCGAGCGACTTCGAGGAGGTGCCGATCGACACCGCTGACGGAGGCGGCGGCAGTCGCATCGGCGCCTGGCGTTCAGCGGCTGCTGCA 3 2 5' arm Ricinus_communis mirnest 100 100 -34.4 .((.....((...((((((((((((((.((((((.......))))))..)))).))))))))))..))....)).. (-34.4)