mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTGTACTCTCTCTCTTCTTC AGAATAGTAGAGAGTGTGAAA AGCTAAGGTAGTAGAATAGTAGAGAGTGTGAAAGCAATGATTGCAGAAAACCAAAAGAGAAGGGGAGCCAGAGTGTTCTTTATTCGCCCTTTTACACTTTACTTGCACAAGCAGCGCCTGCCCTTCTAATCTACACCCACTGCTATTTCTGTACTCTCTCTCTTCTTCTCCAATCAA CTGCAAGCTAAGGTAGTAGAATAGTAGAGAGTGTGAAAGCAATGATTGCAGAAAACCAAAAGAGAAGGGGAGCCAGAGTGTTCTTTATTCGCCCTTTTACACTTTACTTGCACAAGCAGCGCCTGCCCTTCTAATCTACACCCACTGCTATTTCTGTACTCTCTCTCTTCTTCTCCAATCAACAGTCAACCCCACCTCAAAAGGCGCCAACTTTCCTTCTCTCTCAACCCAAATATTGCCTGCCTCATTTTCTTTTCTTTTACTTTTCTAATTTGACTCTGTATAATAATAAACTGATATCGGCAGTACAAGTACAATCCTAATTTCAGGAAAATATAAAATAAAAATAGAAATTGAAAAAATAAGCCAAGAAAAATAGAGAAATGGCAAAAGAGCAAAAGGAAAGCTCTGTAGCAATCATCAATAGCACCACCCTACATCCTCAGGACAAAGAAG 3 2 3' arm Ricinus_communis mirnest 100 osa-MIR529a 0.0005 -38.8 ......((.((.((((.((.((((((((.(((((((.((..((.(((..........(((((((..((.(((((((.................)))))))..((((....)))).))...)))))))..))).))..)).))))..)))..)))))))))).)))).))))...... (-38.8)