mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCATCATCATCATCTTCT ATTGATGATGATGATGAGC TACACAAACCATCATCATCATCATCATCTTCTTCCCCAAAAATTCTTTGAAACCAATGTGAAAAAAAAAACATTTGCTTCTCCCATGGCATTTCCCACCACTCCAGAATGGATCATCCCCTGCAACAACAACACTGCAAGGATCAGTAGTAACAGCAGATTGATGATGATGATGAGCAGAAACAG GATAAGCTAAGCTAAGATTCCCATACACAAACCATCATCATCATCATCATCTTCTTCCCCAAAAATTCTTTGAAACCAATGTGAAAAAAAAAACATTTGCTTCTCCCATGGCATTTCCCACCACTCCAGAATGGATCATCCCCTGCAACAACAACACTGCAAGGATCAGTAGTAACAGCAGATTGATGATGATGATGAGCAGAAACAGAAACCTCCCTTTGCTCTCTCTCCTCTCCTTCAACTCCTCCAGGGATCTCAACCTTTCTGCAAGATCCTCCAGCTGCTCAGCCCCAGTTCTTGAACACCAAGCTTCCTCCACTCCCAATAACTCCCAGCCCACCATANAATTGGACTTGCAGCTTCAGGATCTTTGCCCTTCTCCTTTGCCANAGCCTGAGGATTTCAATGCCCTTATCTGCACCTTACTCAAGGATCCCCACACTGCAGGGATTGGGCACGAGTATTACGAGAAGGCGAAGGGGAATCCGGGTTTTATCCCACAGA 1 2 5' arm Ipomoea_nil mirnest mir-598 0.0007 100 -31.9 ...........(((((((((((((((...(((..............((((....(((((..........)))))((((........))))..(((..............)))...(((..((((..........)))).)))))))..........))).))))))))))))))).......... (-31.9)