mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTACAGTACATGTGTTTTTC TAGGCAAATTATTGTGTGAAG TAGTGACAGCTTCTACAGTACATGTGTTTTTCAGCGTAGGCAAATTATTGTGTGAAGCATAGAGA GACAAGCAAATTTTCCATAAAGGGGTGGGTTTCGTAATAATTTCACTGCACAATACCTTCGTATCACATATCTGATATGAACAATTTCTACAGAACAAAATGGCAAATGTAAAGAAAAATGGAAGTGACAAAGCATGAAAGTATAAACGCTGGCAATGCAGTGCGACATGAAATCAACACAGAACAGCAACACTAAGCAACCGAGGGCTATGCACACAGGGCCGCGGCTGCTATCGCTGATGTTTCAGTAGGCCTGGGCCCGCGGTGTGCTGCGCATAGCGGAACGATTCACTCTCGACGAATGGTCGCTTGCTGTAGGTGGAGCCGCGTCCCAGTGAGCCGGGCACGACGACGAGGTTCCAGTCCAAACTCATCTGATCTTGACCGCCAGTGAACAATGAGACGATCGGGCAGATCAATATGCTCATCACAAAAGCGACGATCGGATGAAAATGCAAAGGCATTTGAGACGCCATCAGCACCACCTTCTCCATGTTGAATGATCTTATCACCACAGTAGCATTAGTGACAGCTTCTACAGTACATGTGTTTTTCAGCGTAGGCAAATTATTGTGTGAAGCATAGAGATAAAACAGAGCCAGGGAGGAGATGGCGGTGACAATCAGTGAAGTCATTGCTCCTTT 4 2 5' arm Ancylostoma_caninum mirnest 100 100 -12.8 ........((((((((((((.((.(((((........))))).))))))))).)))))....... (-12.8)