mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATCATCGTCTCAAATGAGTCT ACTCCATTTGTTTTGATGATGG TGTGGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTACGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATT CCTGGTGGTGTCTCCAGAGCTTTGTGGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTACGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATTTCGTCGGATGGAAAGGAGTGTTCTCTGAAGACTGGTAAGGTCGTGACGCGTCCAGTCAGTGGCTGGGACGGCAGAGATCAGAACCTGGGGCTGGGGAGGCGGGGATTGGAGGAAAGGCAGTGGTTTAGGGTCTCATGAGGTCAGGGTCTCTAGGACAAGTTAGATGCCCACCTAGTCTGAATCAGCAGAGGAAATCTCCCTGGGTCTAACTTAGGGCATTCTGTAGAGAGAAAAGATCCTCAACCCCCCTGACCTTTGCACCTTTGCACCTGAGGCTTATTCTGCCTGTCTGGCCTGCCTGCTTCCCCCCACGGCTGTGAGAAATTCACAGTTCATAAATTCTGTGGTGTGATGGGCCCAG 3 1 3' arm Ancylostoma_caninum mirnest mir-136 5e-40 oar-mir-136 5e-46 -45.4 .((((...((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))..)))). (-45.4)