mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACTCCATTTGTTTTGATGATG TCATCGTCTCAAATGAGTCT TTGTGGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTACGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATTT CCTGGTGGTGTCTCCAGAGCTTTGTGGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTACGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATTTCGTCGGATGGAAAGGAGTGTTCTCTGAAGACTGGTAAGGTCGTGACGCGTCCAGTCAGTGGCTGGGACGGCAGAGATCAGAACCTGGGGCTGGGGAGGCGGGGATTGGAGGAAAGGCAGTGGTTTAGGGTCTCATGAGGTCAGGGTCTCTAGGACAAGTTAGATGCCCACCTAGTCTGAATCAGCAGAGGAAATCTCCCTGGGTCTAACTTAGGGCATTCTGTAGAGAGAAAAGATCCTCAACCCCCCTGACCTTTGCACCTTTGCACCTGAGGCTTATTCTGCCTGTCTGGCCTGCCTGCTTCCCCCCACGGCTGTGAGAAATTCACAGTTCATAAATTCTGTGGTGTGATGGGCCCAG 3 1 5' arm Ancylostoma_caninum mirnest mir-136 5e-40 oar-mir-136 5e-46 -45.4 ..((((...((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))..)))).. (-45.4)