mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATTTTATGAGATCGGTCCTTC AGGACGAATTTATGAACAAA GAGGACGAATTTATGAACAAAAAGATAGTTACGTGAGCCTTACTACTGCAGTGACTGCAAAGGAAAGCTGAAAACATTCCTATGCAATTTTATGAGATCGGTCCTTCTCTCGCCACC GAGGACGAATTTATGAACAAAAAGATAGTTACGTGAGCCTTACTACTGCAGTGACTGCAAAGGAAAGCTGAAAACATTCCTATGCAATTTTATGAGATCGGTCCTTCTCTCGCCACCATGAAGACTTCTAAATCAGCACCAAAGACCTCTGCTCGAGAGGAATGTGGTGTGTGGTTGGACACTACGCAGCTGAAAGGAAGAGCAAAGCAGAAACGACTCGCTCGTCCCATATCTAAGCTGCTGAATCCTTACGCTGGAGGTGGCGGATACAATTTGGCTGTGGCACTCAACTTCACTCAGACCAAACTGGAAATGCCAAAGACCAAACAGAGCGCCATATCAACCTTCTTCACAGCTCAGCGCAGAGTTCTCAATAAGATGTCTACTTCTGAAGAGCCGAACATGGATCCAGGTGTGCCTCCTTCACCATCTGCCTCAACCACATGTGCACCTGTGACAAAACGAAGACGTGAAATAGATCTTGATTTCGATAACATCGAGCCTGGTGTTGATCATGAGTGGAAAAGTAAAAATGTTCCTGAAGAAGCAGTGTGTCAGGAGCAGACAGCAAGCCGTTCACCTTCTCAAAAAATGCACTTTGAATTTGAGGAGGAGCAATTCAAGGAGATAAATCCACCACAGAGTAAGAAGAGGCTCACTGTGACCTCCTATTTGCCATATGACAGTCAACCTCTTCCACAGGCCTGGAGTCAGGACCCATTGTTCACTTGTAGCCAGTATTCTGAGGGTGAATATAACCTGACTGACCCGAAAAACACAGAAGCAAAGGACATTAGTGACTCTGAGACAAGTTTCTTAAACAGTCTCCAAAGTGAGGATGCCTTTGGTATT 4 1 3' arm Sparus_aurata mirnest 100 100 -22.4 ((((((((.((((((((((......((((...((((...)))).))))...))..((((.(((((...........))))).))))..)))))))).)).))))))........... (-22.4)