mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGCACCATTTGAAATCGGT CGATTTCTTTTGGTGTTCAGA TTGTCCTCAATCCAAGGTTGACCGATTTCTTTTGGTGTTCAGAGTCTGCTTTTGTTTCTAGCACCATTTGAAATCGGTTACAGTGAAGGACAGATCT GAGTGTATTTCCTGGCCAGTAACAGGCAGCCTATGAAGTACCACCAGAGGATTCCAGAGGTAAAGGTGAAAGACGGAGACGGCTTCTCCTGCAGAGTATCACTCCCTGAAGCAGCGCTCAGTGGGATGCAAACCTTCCATCCATCTTCAGCGACGTTTGGACAGCTCAAGCTTCTTTGTCCTCAATCCAAGGTTGACCGATTTCTTTTGGTGTTCAGAGTCTGCTTTTGTTTCTAGCACCATTTGAAATCGGTTACAGTGAAGGACAGATCTCATCGTACCCGGCGGAGTTCTTCGCAACTGAGCCGCTCTCTTTATTTCACCGACTGGACTGACTGCGGTGGATTCTTTTCATGTTGTTCCGACTTCTCTATCCAACCTGCATCTCTCATTGATATCTCGATTGATGTTTGCAGCTGACGAAGATGTTTTCAGATCTTTTACTACAAGTGGAAACGGACAACTTTCCCCCCCCACAGATCACTCTACTGA 3 1 3' arm Sparus_aurata mirnest mir-29 1e-19 tni-mir-29a-1 9e-26 -31.1 (((((((((.......((.((((((((((...(((((((.((((...........)))))))))))...))))))))))))..)).))))))).... (-31.1)