mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGCTGTTTGGTTTCGTTTTG AGACAGCCGAGCCGTCTGC CGGACAACAAGAGGCTGTTTGGTTTCGTTTTGCACTCGGCAAGCGAGCGGTGAGACAGCCGAGCCGTCTGCTACAT GAGCAGTATTAGCTCTGTGGGCTCAGAACCATCACCTGCCCTTTCTGTGCTCTCATTGGATGCACTGGTCGCCCCGGACACACCCATCCAGTTTGACATCATTTCCCCCGTCAGCGAGGAAAACTCAGGACAGAGCAAGACGGCAGCACAGTCCGGCAGAAGAAGTAATCCATTTGGAGAGTCAGGAGACAGCACATCAGAAGACAGTGAAGACTCGATCCTCCACCAGCTCTTTATCGTTCGCTTCCTGGGCTCCATGGAGGTGAGGGCTGCCGAGTCAGCAGACGTCATCTCTGAGACCATGAGGCAGATCCTGGCGGCCCGAGCCATCCACAACATCTTCAGGATGACCGAATCACACCTGCTGGTCACCTGTGACTGCCTCAAGCTCATTGATCCTCAGACACAAGTCACTCGACTCAGGTTTCCTCTGTCCAGTGTGGTTCAATGTTCATCCCATCCGGACAACAAGAGGCTGTTTGGTTTCGTTTTGCACTCGGCAAGCGAGCGGTGAGACAGCCGAGCCGTCTGCTACAT 1 2 5' arm Dicentrarchus_labrax mirnest 100 100 -22.3 (((((.......((((((((....(((((((((.....)))...))))))..)))))))).....)))))...... (-22.3)