mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGTCTGGGCAGGGCTGGGCAG GGAGCCGGGCCGCAGCTGGGGCTGG GCCGGGGGAGGGCGGTGCGGTCGCGGCTGGCGGCAGAAGCGGCCGCAGGGGGTCTGGGCAGGGCTGGGCAGTGCTGCTGGAGCAAAAGCGGGAGCGGGAGCCGGGCCGCAGCTGGGGCTGGAGACGCCGTCGCAGCCTGAACGGAGTGTGCGACGGATTGGGAGGTCG GCCGGGGGAGGGCGGTGCGGTCGCGGCTGGCGGCAGAAGCGGCCGCAGGGGGTCTGGGCAGGGCTGGGCAGTGCTGCTGGAGCAAAAGCGGGAGCGGGAGCCGGGCCGCAGCTGGGGCTGGAGACGCCGTCGCAGCCTGAACGGAGTGTGCGACGGATTGGGAGGTCGGGAACTACAAGCGGACTGTGAAGCGGATCGACGATGGCCACCGCCTGTGCAGCGACCTCATGAACTGCCTGCATGAGCGGGCACGCATCGAGAAGGCGTATGCGCAGCAGCTCACTGAGTGGGCCCGGCGCTGGAGGCAGCTCGTGGAGAAGGGGCCCCAGTATGGGACCGTGGAGAAGGCCTGGATGGCCTTCATGTCCGAGGCAGAGAGGGTGAGCGAGCTGCACCTCGAGGTGAAGGCCTCACTGATGAACGATGACTTTGAGAAGATCAAGAACTGGCAGAAGGAAGCCTTTCACAAGCAGATGATGGGCGGCTTCAAGGAGACCAAGG 5 1 5' arm Pongo_abelii mirnest 100 100 -68.8 (((.......)))..(((((((((..(((....)))..)))))))))...(((((.(((..((((.(((.((.(((((........)))))..))....))).))))...))).)))))...(((.((((((((.((.....))....))))))))........))). (-68.8)