mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGTGCGGAAATGCTTCTGC GGAAACATTTCTGCACAAAC TTTCTTCCGAAGAGTACTCTATAAATCTAGTGGAAACATTTCTGCACAAACTAGATTCTGGGCACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGGGTTTGTCTACATTTTT GCAACAGTGGAAACCCATTGAAGAGTTGCAAAAGGTCCAAAGGGTGACCGAATGACCAGCCCTTGCCTCTTTCTTCCGAAGAGTACTCTATAAATCTAGTGGAAACATTTCTGCACAAACTAGATTCTGGGCACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGGGTTTGTCTACATTTTTGGGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2 0 3' arm Pongo_abelii mirnest mir-147 5e-16 hsa-mir-147b 1e-37 -37.7 ..........(((..((((((.((((.((((((((.((((((((((((..((((...)))).......)))))))))))).)))))))).)))).))))))...)))........ (-37.7)