mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATGAAGTGTGATGTTGACATC TGCCAACACTGTGCTTTCTGG GAAACCACCTACAATTCCATCATGAAGTGTGATGTTGACATCCGTAAAGATCTGTATGCCAACACTGTGCTTTCTGGTGGTTCCACCATGTACCC CAGAGGCTATGTTTCAGCCAGCCCTCCTTGGCATGGAATCTGCTGGCATCCATGAAACCACCTACAATTCCATCATGAAGTGTGATGTTGACATCCGTAAAGATCTGTATGCCAACACTGTGCTTTCTGGTGGTTCCACCATGTACCCAGGTATTGCTGACCGCGTGCAAAAGGAAATTGCTTCTCTCGCTCCACCAACCATGAAGATCAAGATCATTGCCCCCCCAGAGCGTAAATATTCTGTCTGGATTGGAGGCTCCATCTTGGCATCTCTTTCCACCTTCCAGCAGATGTGGATCTCCAAGCAAGAATATGATGAGTCTGGTCCTGCAATTGTGCACCGCAAGTGCTTCTAAATTCACTGGAAATGTCCAAAAGTGAAAAGTTGCGTTCTAGTAGACCAATCAACATGAAAGAAGACAGTGGATATAAGACAAAAAATAATAAAATGAAAAACAGGAATTGTGACGTTCTGTACATTTGTGTTAACTTGTGATAATGATTCAAGTGCATTGTGCAATAAATGAGTGTTTTGTTGTGTTAAAATAACTAATAAAAAATGTTTTGAAACAA 4 0 5' arm Acropora_palmata mirnest 100 gga-mir-3533 0.00000000000008 -17.8 .........((((...((((((.((((((((.(((((.(((.((........)).))).))))).)))))))).))))))........))))... (-17.8)