mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAGGGCGGGGGGAGGAGGAGG CTCTCTTCCCTCTGCCACCGT AAAAAAAGGGACAAAAACGGGAAGGGCGGGGGGAGGAGGAGGAGGACGCCCCTCAGAGGCGTTTGGCACGATGGTGAGAGCGATGCCCCCCCACCCCCTCTCTTCCCTCTGCCACCGTTTACCGGGTCCACCCCTG GCCGCCCTTTTTTTTTTTTTTTTTTCTTTTTTTGTGTTGGGAAATAAAACCTCCCACAAAAACAAAATAATGGCACGGAAGTGCGTGAAAAAAAAAAAAGGGACAAAAACGGGAAGGGCGGGGGGAGGAGGAGGAGGACGCCCCTCAGAGGCGTTTGGCACGATGGTGAGAGCGATGCCCCCCCACCCCCTCTCTTCCCTCTGCCACCGTTTACCGGGTCCACCCCTGCTGCATCTTCGGGTTCCACATAAAACCAAACGACCCGCGGCGGTGCGTCTGCTGCTTGTACACCTACCCCACAGCGCGAAGGGGGGACTCTATGCGCTTGCGGTCGCGGGCGTCCAAAAACTCCTTCATCATCTTGCTCCCGTCCGTGCGGCAGCGCCAGCGGCGGCCCACCACGTCGCTCGGGTAGATCATGTCATTCAAAATGTTCTCGAACACCGCCGTGCTCTTCTTCGAGCGCTGCTCCTTCTGCAGCTTGTACACGTCCGTCGGGCGCTTCGTGATCTGGCGCTGCACAACCAGCATCACCAGGCAGCCCGGGTGGCGTTTCTCCAGCTCGGAGGTGAGCGC 4 0 5' arm Phlebotomus_papatasi mirnest 100 100 -51.2 ........((((..((((((....(((((((((((((((.((.(((((((.......)))))..((((((..........)).))))......)))).))))))))))))))).)))))).....))))....... (-51.2)