mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCCTAGCCCTGGTCTTGGTCC TCTGAGACTTCGGCTGGGATT TAAACCTATTTATCTGAGACTTCGGCTGGGATTTCGAGAACGGAGCAGAGAATGCGACAAAGTTTGCCAGCCAAGACGGCGCAGTGCAATCAGCAGATCCTGTCTGTCCTGGTCCTAGCCCTGGTCTTGGTCCCAAGGAGCA GCCATCCCCAAGTGGTATTAATTCAATAAACCTATTTATCTGAGACTTCGGCTGGGATTTCGAGAACGGAGCAGAGAATGCGACAAAGTTTGCCAGCCAAGACGGCGCAGTGCAATCAGCAGATCCTGTCTGTCCTGGTCCTAGCCCTGGTCTTGGTCCCAAGGAGCACGAGAAGCCAGATTCGATGCCGCAAACGAGTCCCAATTGGAGGCAGGCGGACAATGAGCGCACAAAAGGCGCTGTAAGTGTCATTGCAGCCAGGAACTGGGCCACTGGGACTGCCACGCAGGACTGGAGCCAGAAGAGCAGCAGTAGCTGGAGCAGCACCAGTCGAAG 5 0 3' arm Drosophila_sechellia mirnest 100 100 -45.9 ....(((......((((((((..((((((((((...((.(((((.(((.((.(((........((((..(((.....)))))))........)))..)))))))))).))))))))))))..)))))))).....))).... (-45.9)