mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CAATCAGCAAGTATACTGCCG GCAGTGTCTTAGCTGGTTGTT AGTGGTTCTCTGGCAGTGTCTTAGCTGGTTGTTGTGAGGAGTGAGAACGAAGCAATCAGCAAGTATACTGCCGCAGAAACTC GGGGGAACAGGGAGAACCCAGCAACATGAGAGTCACAACATAACGATGGACTCATTGGAAGCACTGGCGTTTGTACTGCTGTGCAGCATACCATACCCTCCAGTCCTGAAAACACAAAGAAACCCACTGCTTCTAAACTGCTCTGAAACTTTGCCTGTGTCCTCAGATCCAGCCTTGTTTCAGTTACCTGAGGAATTTGGATTGGAAATGTAGAAACACTGGCACATAACCAGCAGCCTGACAGAGATGACGACAGATCTGACACAGCGGAGATCTGCTGTCCCTGGCATAGGACTACAAAACCCTGGCATAGGACTACAACCCCAAAACAAAAAAGAGTGTCAGACTGCTAGCCGAAGGATCTGAAGGACACAAATGAATCCCCTTCCTCTCACTTACATTCCGAATCCCTCATATCAGGTGAAACCTGACCGTAACGTCTGTCTATGACGAACAGGCCTCAGAGACTCCCTGCTGGTTGCATGGCAGAGAGACGGCCTGGCTTGAAGAAGGGGAGACAGGAGGAGATGCTGTTAGATGTGGCTACTGTGAGTGGTTCTCTGGCAGTGTCTTAGCTGGTTGTTGTGAGGAGTGAGAACGAAGCAATCAGCAAGTATACTGCCGCAGAAACTCTTCGCACTGAGAGGCCGCCGGCTCTCATTGTTCATCACTCAGAGAGGGAGAAATAGGAAGCGGAGAAAGGAGGAGAGTGGTACGTATTTTCCAGTGATCCTAAACAGATTTTAAAGCGTCTGGTGATTGCGTCTATGGAATTCATGAGCGTTTTTCCAATTCTCATAGCTCGGTAGACTAAGACTATTTTTTTCCAACGATGACATTTGGTTGGTGTACATTTATGTCATGCTAATATGTAAACATGTATTGTTTACGTCATGCTGTTTGTGAACCAAATGATCATGTATTTCTA 0 2 3' arm Osmerus_mordax mirnest mir-34 4e-37 dre-mir-34 6e-39 -31.8 .....((((.((((((((((((.((((((((((.......((....))..))))))))))))).))))))))).)))).... (-31.8)