mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGCAGTGTCTTAGCTGGTTG ATCAGCAAGTATACTGCCGCA GAGTGGTTCTCTGGCAGTGTCTTAGCTGGTTGTTGTGAGGAGTGAGAACGAAGCAATCAGCAAGTATACTGCCGCAGAAACTCT GGGGGAACAGGGAGAACCCAGCAACATGAGAGTCACAACATAACGATGGACTCATTGGAAGCACTGGCGTTTGTACTGCTGTGCAGCATACCATACCCTCCAGTCCTGAAAACACAAAGAAACCCACTGCTTCTAAACTGCTCTGAAACTTTGCCTGTGTCCTCAGATCCAGCCTTGTTTCAGTTACCTGAGGAATTTGGATTGGAAATGTAGAAACACTGGCACATAACCAGCAGCCTGACAGAGATGACGACAGATCTGACACAGCGGAGATCTGCTGTCCCTGGCATAGGACTACAAAACCCTGGCATAGGACTACAACCCCAAAACAAAAAAGAGTGTCAGACTGCTAGCCGAAGGATCTGAAGGACACAAATGAATCCCCTTCCTCTCACTTACATTCCGAATCCCTCATATCAGGTGAAACCTGACCGTAACGTCTGTCTATGACGAACAGGCCTCAGAGACTCCCTGCTGGTTGCATGGCAGAGAGACGGCCTGGCTTGAAGAAGGGGAGACAGGAGGAGATGCTGTTAGATGTGGCTACTGTGAGTGGTTCTCTGGCAGTGTCTTAGCTGGTTGTTGTGAGGAGTGAGAACGAAGCAATCAGCAAGTATACTGCCGCAGAAACTCTTCGCACTGAGAGGCCGCCGGCTCTCATTGTTCATCACTCAGAGAGGGAGAAATAGGAAGCGGAGAAAGGAGGAGAGTGGTACGTATTTTCCAGTGATCCTAAACAGATTTTAAAGCGTCTGGTGATTGCGTCTATGGAATTCATGAGCGTTTTTCCAATTCTCATAGCTCGGTAGACTAAGACTATTTTTTTCCAACGATGACATTTGGTTGGTGTACATTTATGTCATGCTAATATGTAAACATGTATTGTTTACGTCATGCTGTTTGTGAACCAAATGATCATGTATTTCTA 0 2 5' arm Osmerus_mordax mirnest mir-34 1e-37 dre-mir-34 1e-39 -35 ((((..((((.((((((((((((.((((((((((.......((....))..))))))))))))).))))))))).)))))))). (-35)