mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACATTATGGGACGGAGGGAGT TCTCTCTGTCCCATACAGTGTCA CTTATATATGTACTCTCTCTGTCCCATACAGTGTCAAAAAACGAAACGTCTTACATTATGGGACGGAGGGAGTACAATACATG CAGGGCAGGAACAATGGGCCCCCTACTAACCGCCGTCGAGGGGGTGTACACCATATGTCGGAAGAGGAGAGGGAAGCTCGTCTGCGGCAAATGCAGGCTGACGCGGAGGTCCACGAAGAGCAGAGGTGGAAGAGGATCAAGAAGGCTGCAGACGACGACGCCAAAGAAGCGTCCACAGTGGCTGCAAACCAGTTCAGAGGGAAAAACTTCTTGGACGACGAAAAGAAGAGTATATTTGGTGCTGACAAGGGCGGCAGCGCCACCATCGAAGAGAGCATCCGCCGCCGCGCTTATTATTCTCAGGGTGGCGGTGATGCGCACGAGGCCAATGCGTTCAGGCGGTGAAATCCCTGGAGCGGCAGCTCAGGCTTCATATATTTCTGTTTGCAGCTTTGTCTCTTGGTCTTCCTTTTCCAGTCTCATGTTTGTATGATGTACGATACTTGGAAGGAATTTTATTGTTCTTATATATGTACTCTCTCTGTCCCATACAGTGTCAAAAAACGAAACGTCTTACATTATGGGACGGAGGGAGTACAATACATGGCCCTCATCNNNTGGAATCCAGAAATTTGTATTGACACTAGTTAATTGGCCGTGTGTTGCTAGGGGGCATACATACTTNNNTGGTCCGACATCAATCTTTAGGATCCTCTT 0 2 3' arm Elymus_wawawaiensis_x_Elymus_lanceolatus_mixed_EST_library mirnest MIR1122 0.0000000003 tae-MIR1130 0.0000002 -35 ........((((((((((((((((((((..((((...((.(((...))).))))))))))))))))))))))))))....... (-35)