mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTGTGTGTGTACATGTATAG ATTTTGTGTATACGCATAGATA ATTTATATAAACACAAGTGTATGTGTGTGTGTACATGTATAGTATTTTGTGTATACGCATAGATATTCCAAGTGTAGTTTTCT TTTTTTTTTTTTTTTTTTAGNTGTGAACGGAATAAGAAATTTTAATTTTTTAAATTATTTACAAGAAAAAAAAAAATAGTAAAAGAAATCATGGAAGATCATTATATATATATATATATATATATATATATATGAAAAGAAGAAAATACAAGAGCTTTTTTAATAGAATTCTTCTCCACCTTCACCAACATAATTTTATTTATATAAACACAAGTGTATGTGTGTGTGTACATGTATAGTATTTTGTGTATACGCATAGATATTCCAAGTGTAGTTTTCTTCATAGAGATCGAATAAACAATCCTTTGAATCTTACAAATGTTTTTATATAAGAGTGCTCAGCAAAAAGTAGAGCAATATTTTGTATGAATCTTTATGCAAACATTTCAGGCTAGACATGTGTATACATGATTTAGCTAGAACCTGAAGCATGCTAACGCCCTAGCGGAACAAAATCCTAAAAGGAAACTGAATATAAATCCAAAGAAAATTACAATTGGAGGACATCATGCCACCAGAATATCAGCATCCACTCAAACTTAATTTACTGTTCCATCTCAAAGCTTCTTTTTAAAAATAATTTTGTTTTTCCACTTATTCTGGTCACATGATATCCGAATAGAAAGGTTATTTTTGTCANATTCCTGTTTAAGATA 4 1 5' arm Euprymna_scolopes mirnest 100 mmu-mir-466k 0.001 -19.2 ..........((((....((((.((((((((((((((.((...))..)))))))))))))).)))).....))))........ (-19.2)