mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GCCGCTGCTGCTGATGCTGCC GTAGCGCCAGCCCCAGCGGCAG TCCGACAGGTCGAGTAGCGCCAGCCCCAGCGGCAGCTGCTGCTGCTGCTGCCGCCGCTGATCCTGAACCGTAACCGTCATCATCCCATGCATACCCGGCGTCTGATCCTCCAGCAGCTGAGCCAGCTGCTGCAGCTGCCGCTGCTGCTGATGCTGCCGAAGAAGCTG CGAGTTTTTTTTTTTTTTTTTTCATATGCTGATATTTATTGATAAAGAAATAAAATGTATTCGGTCAAACATAGTAGAAATTACATTCGTATTTAATTAGTGGACGGAAATTCTGGAAGCTTCGTAACTATGTCCGTGAAAACATGGCTTACAACATATCGAAAGAAGTGGATGACCTCCAGCTGATCTAGCACCTGATGACGCTGCAGCTGCTGCTGCTGCTGCTGCCGCCGCTGCTGATCCCTCTGAATCGTAACCTCCATCTAATACGAAGCCATCGTCTGATCCATAAACTCCGACAGGTCGAGTAGCGCCAGCCCCAGCGGCAGCTGCTGCTGCTGCTGCCGCCGCTGATCCTGAACCGTAACCGTCATCATCCCATGCATACCCGGCGTCTGATCCTCCAGCAGCTGAGCCAGCTGCTGCAGCTGCCGCTGCTGCTGATGCTGCCGAAGAAGCTGAACCATAGGCACCGTCGCCTCGTCCGT 3 1 3' arm Antheraea_assama mirnest 100 100 -61.4 .((....))(((.((((((.((((..(((((((((((((.((.((((((...((.(((((((..((.(((.....(.(((......)))).....)))..)).))))....))).))..)).)))).)).)))))))))))))..)))).)))))))))........ (-61.4)