mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGCAGGAGCCTGAGGCATGGG TCTGCCAGCGGCCCTGCCAA CCAGCAAGACCTGCAGGAGCCTGAGGCATGGGAACACCAGCTGGGATTCCTCTGCCAGCGGCCCTGCCAATCCCTGGG CTTTTTTTTTTTTTTTTTGATATTCTCTTAAGAGTTTATTATAAACCAGTTTCATAGGCCACAAGGAAATAAAAGGACTATGTACAGCCTTACAGGACACAGGCAGGGAGCTGAGGAGGGCCAAGATGAGTCTAGGGCCTTGGTGGGCGCATTCCCGGGGGAGGGGGCCCTGTAAGGGAAACCAGACAATCCGGTGAGACTCCGCGAACAACAGCATAACAAACAAACAGGTCTGTGGTAGCGTGGCCCTGGGGGATCGGGCCCACGCCTCTGTGGATCTACTTCCATAACTCTGTGGCAAGGGTCAAAGGAGGTGGGCCCATCATGCCTGGAGGAGGTGCACCTCGGCCCATGGGTGGGGGAGGACCCGCACGGCCAGGTGGGTACTGGGTGGGGGCCCCTGCAATACTAGCTGTGGCAGCTGCTGCAGCGGCTGCAACAGTGCCTCTTCCTTGAGGGGTCATCACCTGTTGGGATGGCCCACCAACCCCACGGACTGGGCCAGCAAGACCTGCAGGAGCCTGAGGCATGGGAACACCAGCTGGGATTCCTCTGCCAGCGGCCCTGCCAATCCCTGGGCCCCCAGCAGCTCCAGCAAGTGGTACTCGGGCAATGCCAGTATCTTTGGGGGGAGGACCCTCTACCGTCATGGAGACCAGGTTCTCCCCGCGCAGCAGCACCAGGCCGAGGACTCGCTTCTCTTCCCTTTCTGCCTGTTTGGAGTTCTTCGGCTTGATCTTCCTGAACTCATCACAGTC 5 1 5' arm Oryctolagus_cuniculus mirnest 100 100 -30.7 ((((...((...(((((.(((...((((.(((((..((....))..))))).))))...))))))))...)).)))). (-30.7)