mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTCACTGATGAACAGTTTCTG GGATCAGTTCCCAGTGACGC ACATCCTCACTCTCACTGATGAACAGTTTCTGGTGCAGGATCAGTTCCCAGTGACGCCCGTGAGC ACAGTTTCGGTCGGAATCCCGGGATCGGGCGGCCTTCCTGGGCTGCCTGACTGACGTCCGCCAGGCGCTGGCAGCGCCTCGAGTGGCTGGGAAGGAGGGCCCTGGCCTGGCCGAGTTGCTGGCCAATGTGGCCAGCTCCATCCTGAGCCACATTAAGGCTTCTCTGGCAGCAGTGCACCTTTTCACCGCCAAAGAGGTGTCCTTCTCCAACAAGCCCTACTTCCGGGGGGAGTTCTGCAGTCAGGGTGTCCGTGAGGGCCTCATCGTGGGCTTCATCCGCTCTATGTGCCAGACGGCTCAGAGCTTCTGCGACAGCCCTGGGGAGAAAGGGGGTGCCACACCACCTGCCCTGCTCCTGCTGCTCTCCCGCCTCTGCCTGGACTATGAGACGGCTACCATCTCCTACATCCTCACTCTCACTGATGAACAGTTTCTGGTGCAGGATCAGTTCCCAGTGACGCCCGTGAGCACACTGTGTGCAGAGGCCAGGGAAACTGCACGGCGGCTGCTGACCCACTACGTGAAGGTGCAGGGCCTGGTCATATCACAGATGCTGCGCAAGAGCGTGGAGACTCGGGACTGGCTCAGCACTCTGGAGCCGCGTGGGGCTTCTGTACGAAGAGGGTGTTCGCAAGGCCCAGAGCAGCGACTCCAGCAAGAGGACCTTCTCCGTGTACAGCAGCTCTCGGCAGCAGGGCCGCTACGCCCCAGCTATACCCCCAGTGCCCGATGGACACCACCCTCTGAGCATATCCAGAGCTATCTCTGACGTATGATGTGTCAGCCTGTGAGTCACAGAT 5 1 5' arm Macaca_nemestrina mirnest 100 100 -16.6 .....(((((..((((((..((((...(((((...)))))...)))).)))))).....))))). (-16.6)