mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTGTATGCCCTCACCGCTCAG GGTGCGGAGAGGGCCAACAGTG AGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCAACAGTGGACTTGGTGACACTGTATGCCCTCACCGCTCAGCCTCTGGGGCTGGCTTGG TTCCCGGGATGGGAGCCAGACATTCATCCCGGTCACTTTTGGTTACAGGACGTGGCAGCTGGTTGGACAAGGGGAGCTGATGGGCAGGGTTTGATCCCAGGGCCTGGGCAACGGAGGTGTAGCTGGCAGCAGCGGGCAGGTGAGAACCCCATCTGCCGGGCAGGTGAGTCCCTTCCCTCCCCAGGCCTCGCTTCCCCAGCCTTCTGAAAGAAGGAGGTTTAGGGGATCGAGGGCTGGCGGGGAGAAGCAGACACCCTCCCGGCAGAGGGGCAGGATGGGGGCAGGAAAGTTAGAAAAGGTGACATCTTCTCGGGGGGAGCCGAGACTGCGCAAGGCTGGGGGGCTGCGGGCTCATCCCAGGCAGAAAGGGCAAGAGGGCAGGGACGGAGCGCAGGGTGGCCAGCGTAGGGTCCAGCACGTGGGGTGGTACCCCAGGCCCGGGTCAGACAGGGACAAGGCAGGGGACACAAAACAGAGGGGTCCCCAGCTGCCACCTCACCCACCGCAATTCATTTAGTAGCAGGCACAGGGGCAGCTCTGGCAGGGCTTTCTCAGGCCTATGCCGGAGCCTCGAGGGCTGGAGAGCGGGAAGACAGGCAGTGCTCGGGGAGTAGCAGCAGGACGTCACCAGGAGGGCGAAGCGGCCACGGGAGGGGCCCCGGGACATTACGCAGCAAGGAGGCTGCAGGGGCTCGGCCTGCGGGCGCCGTTCCCACGAGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCAACAGTGGACTTGGTGACACTGTATGCCCTCACCGCTCAGCCTCTGGGGCTGGCTTGGCAGGCAGTACAGCATCAGGGGAGTCCAGGGCATGGGCGAGACAGACTAAGCAAGGCGGCCGG 3 1 3' arm Macaca_nemestrina mirnest mir-675 2e-20 ppy-mir-675b 1e-40 -45.9 ((((...((..(((((((.((((.((((.((((((..((((((..........))))))..)))))).)))))))).)))))))))..)))).. (-45.9)