mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTTAGCAAAGTTTCATGCGTT TGCATGATGATTTCTTTGACTT TATTTCAAAAATTGGATATCAAATGCATGATGATTTCTTTGACTTCAACAACACCATTAAAATTATAAAGAAGTTAGCAAAGTTTCATGCGTTGTCTTTTTTCATGAAAGAAA GTTGTTTCAATTCGTTAAAGAAAAAAGAGCCGAATTTTTGCAAAAGGAAAGAATTTAAATCTTCGCGTACAAAATGGCAACTGATACAACGGATACAACATTGCAGTACAATGAGGACGAACTCATTCCTCCAGATTTTCTCAATCAGGATTTTATTCTGAAAGTTTTGCAACAAGAAGAAAATGATGAAACTCTCAAAATAAGACATTTCAAAGTCATCCCCGGAACTAAGCCTGGTGATCATTTTGCCAGTATTATGTTCAAGGCTATTGTTTCTTACACGACTAAAGGGAAGGATGTTTCGGAGAGATCTCTCGTTGTTAAAACGGCCCCCGTTTATGATGGTATGAAGAAGGATGCTCTCAAGGATATGCCGATATTTGATAGAGAAACTAAGATGTATACGAAAGTCTTGCCCGAAATGAAACGAATTATGGAATCAATTGGAGATTATGAAAAAATTTCTCCGAGAATAATTTATCACTGTGATGTGCCTTCAATTCTTATTTTTGAGGATATTTCAAAAATTGGATATCAAATGCATGATGATTTCTTTGACTTCAACAACACCATTAAAATTATAAAGAAGTTAGCAAAGTTTCATGCGTTGTCTTTTTTCATGAAAGAAAATAAAGAAACAAATAATCTTTCTCTTCAAGACTACAAAGGAGTACTTATTAATGAAAAACCTCTTGATTCAATGAAGCAATTTTGTGATGGACTAGATGTCCTTAAAGACCACATACGAAATTGGCCAGGATATGAGGAAATTTCGGAAAAACTCTCAAAGATAGCTCCNTCATTTATGCAGGATTTACTGCAAATCTACNAACCCAATCCTGAACCTGGGTTCAATGTACTCTGCNTGGAGATTTCNCATAAGNACATGATGTACATATGAATGGGCAGGATATGGACGAATATGCTCCTGGACTNCCAATGTGCTCTGGGCNCCCCGNCNCTGGATTTATCTACNTTTGNACGAACTGGAATCCACCGNGNGCGNAAAAGGAGANTTCNGCTTCTNCCAGAAAACGACACTTCCCCNATGGGGNCCGAGANGNCNACGGCNGACCCATCGANTCNAACTGGCCNGGGAATCTCNGGATTGCTCCGCNGGTCCNGGGCCCNCNTTNAAGGAGNGNGGGNCCCCTTNCAGGAATTCCCCGGGNTTNAACCCCTTCGGATTNGGANCCCTTNCCTCGGNAAAGTNGGAAAAATTTTTTGTTTAAAGTNGGGGNNAAAAAAAAAAAAGGGNCCNCCCCCCCCCAAAANGGGCCCCCCGCCCCCGNAAAAGCTTCGGG 2 1 3' arm Lutzomyia_longipalpis mirnest 100 100 -22.7 ...(((((...))))).....(((((((((.(((((..((((((((.......................))))))))..)))))))))))))).((((((.....)))))).. (-22.7)