mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGATGAGGAGGGCGAGGAAT TCTCTGCCACCCTACATTCGAA CGTGGGAGAAGAGGATGAGGAGGGCGAGGAATATTAAACATTATTCTCTGCCACCCTACATTCGAATACTGACG GGGGGGTCCAGAGGGCTGTGTGCATGCTGAGCAACACCACAGCTATCGCTGAGGCCTGGGCACGTCTGGACCACAAGTTTGATCTGATGTACGCCAAGAGGGCCTTTGTGCACTGGTATGTTGGTGAGGGTATGGAGGAGGGAGAGTTCTCTGAGGCCAGAGAAGACATGGCAGCCCTGGAGAAGGATTATGAAGAGGTGGGCACCGACAGCGTGGGAGAAGAGGATGAGGAGGGCGAGGAATATTAAACATTATTCTCTGCCACCCTACATTCGAATACTGACGGTTGGAGGCCCACACGCAACATGAAGACAACTCTTTCCAAACTGCAGTCTATCTACTACATCTAGTCATGTTGTGTTGGCATTTTCAATAAACACCACGTCTCTTGTT 4 1 5' arm Esox_lucius mirnest 100 100 -19.7 (((.((......((((((((..((((.((((((........)))))).))))..))).))))).....)).))) (-19.7)