mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CATGGGTCTGGTTGGGCCCGC GGGCCTGACCAGTCTCAAGAC ATGGCCGAGAGTGCTTGCGGGCCATGGGTCTGGTTGGGCCCGCAGACTCGGAGTGCGGGCCTGACCAGTCTCAAGACCTGCGTGGTAACTCTGCAG GTAGGCCTCGGTGCGGGCTGTGTGCGAGCGGGGCCGGGCTGGGCCGGGCTGGGCGCAGTTGGGGAGGTCGCGGTCACATGGCCGAGAGTGCTTGCGGGCCATGGGTCTGGTTGGGCCCGCAGACTCGGAGTGCGGGCCTGACCAGTCTCAAGACCTGCGTGGTAACTCTGCAGGGACGGCCTCAGGATGCAGAACGACGCCGGCGAGTTTGTGGACCTGTACGTGCCGCGGAAATGCTCCGCAAGCAACCGCATCATTGCTGCCAAGGACCACGCGTCCATCCAGATGAACGTGGCCGAGGTTGATAGGACCACAGGCCGGTTTAATGGCCAGTTTAAAACCTATGGCATCTGCGGGGCCATTCGCAGGATGGGCGAGTCAGATGATTCTATTCTCCGATTGGCTAAGGCTGATGGAATTGTCTCAAAGAACTTTTGAGCAGAAGAAATCGGGAATTTGTTACAAATAAAAGTTTTAAGTACCTGTGAC 3 0 5' arm Leucoraja_erinacea mirnest 100 mmu-mir-3091 1e-37 -47.2 ...((.(((..((((.(((((...((((.(((((((((((((((.........))))))))))))))).))))...)))))..)))).))).)).. (-47.2)