mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAAGTGTGCTGTGGTTTGTCG ACAAACCAGAGTTTAAGTTTCT GTGATGTTACTGACAAACCAGAGTTTAAGTTTCTGCCTCATAATATCATGTACAAAGTGTGCTGTGGTTTGTCGAGAAAGGAC AGGCACGAGGAGACGATATTGAAGCTCGACTCGAAGTGATTGACAATTTCGAGGCTCTTCTCAACGACAATAAATTCAGTGACATGTCGCTCATTTCGGGCGGCAAAGTCGTGAAGGTGCACAAGTGTATACTTGCAAAGAGCAGCTCAGTGTCTGCCGCAATGTTCGAAGCTGGTATGAAGGAAAGTCAAGAGAATACCGTTAAAATTCTTGATATCGAGTATGACGTTCTCGTGGAGATGACTCGCTTCGTTTATACTGGAAGGGCCAACAACATCAATGCATTGGTCAGTGAACTCGTGTTTGCAGCGGACAAATACGAACTTGACCTACTGAAGAAAGTGTGCGTAAATAAGATGCTAAAAAATATAAGCATCGACAATGTCATCGATTATCTTCAGATCGCCGACAAACTCCGGATAGAAGAGCTAAGGGAGGAAGCTATTAAGTTTATTGTTGAAAAAGGGAGGAGTGATGTTACTGACAAACCAGAGTTTAAGTTTCTGCCTCATAATATCATGTACAAAGTGTGCTGTGGTTTGTCGAGAAAGGACAAATAGTTAATTTGTTGGTATTACCTATATTATATTTTAATAAGATTCTTATATTAACTAATAAACTTTACTTCGTCAAAAAAAAAAA 3 1 3' arm Nasonia_giraulti mirnest 100 100 -16.9 ..........((((((((((.(((.((..(((.(((.............))).))).)).))).))))))))))......... (-16.9)