mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGAGAAAGCATCCTTGGTGTC TACTCAGTGTTCTCTCCCT AATGATACTCAGTGTTCTCTCCCTGAGATCTTCCTCAGATAGCTCTCTGTCCAGTTTGCTAGATCTGATCTTTCCCGTATCCTCTTCATCCACCTGAGAATTAGCACTCCAGGAGGCAGTGGGCTCTGGGATATTGATTTCTGGAGAAAGCATCCTTGGTGTCCC GCGCCATCATTTTATTTTCAGTGTCTATGTTCGCCTCACTCTGAGCAAGGAGGGCTCTGAGCGTTTGCAGCTGAGCCAGCATTTGAGCACAGATGACCATGTTCTCTAGCAGTACTTGCTGTCTGGCCACAATGATACTCAGTGTTCTCTCCCTGAGATCTTCCTCAGATAGCTCTCTGTCCAGTTTGCTAGATCTGATCTTTCCCGTATCCTCTTCATCCACCTGAGAATTAGCACTCCAGGAGGCAGTGGGCTCTGGGATATTGATTTCTGGAGAAAGCATCCTTGGTGTCCCCC 2 2 3' arm Rana_catesbeiana mirnest 100 100 -44.8 ...((((((.((((((.(((((..((((((.(((.((((..((((.(((((.....((((((.(((..............................))).))))))........))))).)))))))))))....)))))).))))).))))..)).)))))).. (-44.8)