mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCGCCTCCCCCTCTCCCGTCA ATGGGGAAGAGGAGGTGGGT GGCATGATGGGGAAGAGGAGGTGGGTCCAAGACAGACAGCTGGCTTCAAGAAGGAGAAAAGAAACTTACCCCCTCTGCCCTCAATACCGCCTCCCCCTCTCCCGTCATCC CACAGAACCGGCGGTCCCAGATCAAAAACCTTTTATTAACCCACTCCCAAAGCCCCGCCGAACGTTCAGGCATGATGGGGAAGAGGAGGTGGGTCCAAGACAGACAGCTGGCTTCAAGAAGGAGAAAAGAAACTTACCCCCTCTGCCCTCAATACCGCCTCCCCCTCTCCCGTCATCCCC 2 1 3' arm Cynops_pyrrhogaster mirnest 100 100 -30.1 ((.(((((((((.((.((((((((.((.(((.(((....))).)))...))..(((...(((...........)))...)))....))))))))..)).))))))))))) (-30.1)