mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTCCAGCACAGTGCAGTACAC CTGCTGCGCAGTGCAGTGGATAC CACAGGACGCGACTGCTGCGCAGTGCAGTGGATACTGAAGAAGCAGAGAGTACCCGAGACGAAGCCAGACAGAGAGCGCAGCGACAGCATGACTCAGACCATGTCTCAGAGCTGAAGCATCAGAGACAGCTGAATGTATGATCTTGTCCAGCACAGTGCAGTACACGCAATCGGA TTTTTTGCTGCTTGTACTTGACAGTTTCGGTCCGGATTCCGGGATCTTGATTTTCGCGTTAATACGATTGATACGATGGCCGACGTTGCTGCTGCCCCCAGTGTCGAGGTAAAGGAGCAGGCTCCTCCTGCCGATACGCCCGCCGCAGAGCCCGAGACCAAGAACGGCGATGCCCAGAAGGAACCGGCTCCGGCCGCCGACGAGGGCACTGACTTCTCGAAGCAGGAGCGCGCCATAATCCGTCAGGTGGAGTACTACTTTGGCGATGCGAATCTCAACCGGGACAAGTTCCTGCGCGAGCAGATCGGCAAGAGCGAGGACGGCTGGGTACCCCTCTCCGTGCTGATTACCTTCAAGCGGCTGGCTTCCCTGTCCACCGATTTCGAGGAGATTGTGGCGGCCCTGAACAAATCCGAGGAGGGTCTGATCCAGATTAGCGAGGACAAGCAGAGCCTGCGCCGTCACCCAGAGCGTCCCATTCCCGAGCACAACGAGGAGCGCCGCAAGGAGATCCAGGAACGCACTGCCTACGCCAAGGGCTTCCCATTGGAGTCGCAGATGACCGAGCTGTTGGACTTCTTTGCCAGCTACGACAAAGTAGTCAACATCACTATGCGCAAGCACTACGACAAGCCGACCAAGTCGTACAAGTTCAAGGGCAGCATTTTCCTCACCTTCGAGACAAGGAGCAGCCACCGACTTCTTGCGAGGACAAGTCGTCACAGGACGCGACTGCTGCGCAGTGCAGTGGATACTGAAGAAGCAGAGAGTACCCGAGACGAAGCCAGACAGAGAGCGCAGCGACAGCATGACTCAGACCATGTCTCAGAGCTGAAGCATCAGAGACAGCTGAATGTATGATCTTGTCCAGCACAGTGCAGTACACGCAATCGGAGACTTC 3 2 3' arm Drosophila_ananassae mirnest 100 100 -43.9 ........(((..((((((((.((((..(((((.(((......)))...((.................)).((((...((...(((.......((((....((((((.((((....)).)).)))))).)))).))).)).))))))))))))).))))))))..)))....... (-43.9)