mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTGCTGCTGCTGATGCTGCT CGCAACACAGTGGCACGGG GGCGAACGCTAGCGCAACACAGTGGCACGGGTCGCCGGAGCCACACGACTGCACTGTGCTGCTGCTGATGCTGCTGCTGCTGCT GAACAGTTCAGTGTTTAGCTCGTTGGCTTTCAGTAATTCGCGGCAACAATTGAAACTTGGACACGAATATTATCTAAATGAAACATATTTTCTGTTTTTCTCATTTGCCCCACAAAGTTTGAAAATTGACAGTGACAAAAATTCGAAGATCCAGGCAAACTAATCCACAAAATCTGTTTGTAAGCAGCTCAGCTTCACTGGCTGAACGAACGGCAACAGAAGAGTCGAAAATCAAAAATACTGCAATAAGCAATATCTCCACCCGGCCCGTTATTTACACACATACATAAATATATATATATATATTCATACATAACGTACAAAAGAAAAGCTTCACGCACGCACATATACTTATACACGCACGCACACACACACAGACGCACATAAACCTATACGCAGCAACGACAAGCGATCGCGTCAAGTGAATCAGCGTCTCGCCGTCTCCCACTCGCGAGTACAACGTGAAAGCTCAAGCTCTCCCTCCCATCAGCAGCAACAGCGGCGAAAGCCTCGAGACACTCGTTCGGCCTCAACATGCAGAGCGACTTTCACAGAATGAAGAATTTTGCCAATCCCAAGACCATGTTCAAAAGCAGCGCTGTGCCTGCTGGCAACGAGCAGGCGAACGCTAGCGCAACACAGTGGCACGGGTCGCCGGAGCCACACGACTGCACTGTGCTGCTGCTGATGCTGCTGCTGCTGCTACTGCTGCTCGAGTGCTGGAACAGAGAGCAANGCGCACGATCCACATCGAGAGTGTGGCCACACATGTTACCCCTGCACCTGACCGGTATGAACATCCATCTGAGACGCACATCACTGAACAGATTGATTACTACCTCATATGTGATCTCAGTACTGGA 1 2 3' arm Drosophila_virilis mirnest 100 100 -29.1 ((((...((.((((((.(((((((((((((((((...........))))....))))))))))).)).))).)))))))))... (-29.1)