mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GACGTCATCGTCGTCCTCGTT CGAGAATGACGTAATATCAG GAAGAATGAGAACGAGGAACAAGAAGAACCAATCGACTCAAACGAGAATGACGTAATATCAGAAGATACACATTATAATGACGTCATCGTCGTCCTCGTTGCGGTCGTCTCTATCGTTCTTAGTTTAATACTCTTCATT GCTGAGACGACCGATTCCGAATCAGACTTCACTTTCAGGCCTTCGAAGTGGAAGAGGAAACGGATTGCGAATATGACAACGTTGAGATTTACGATGGATGGAATAAAACATCAGCTCGTTTGGGTCGTCACTGCGGACATGAGATTCCTCCTGATTTCCTGTCGTCTGGATCACATCTTCTGCTGAACTTCAAGACAGATGACACGATCTTCTGGAAGGGATTCTCAGCCACCTACATCCAGGTCCACCCCAACTCTCTCCAACAGCCACCCCCGCCGACCACGGGGGGCAGCAGAGATACTGGAGGCGGAGGAGGAGGAGGAGGAGGTGGAGGAGGGTCAGGAGGTCAGTCCCAGGTTCAGACGATCGACGGAAGAATGAGAACGAGGAACAAGAAGAACCAATCGACTCAAACGAGAATGACGTAATATCAGAAGATACACATTATAATGACGTCATCGTCGTCCTCGTTGCGGTCGTCTCTATCGTTCTTAGTTTAATACTCTTCATTAAAATACTCTTCATTAATATCTGTATTTTACCAAAGGTCATTTCTTAAGCAGCTTTTGAGTTGACCCCCGTCCAATACGGGTCGTATCCGTCGTTTTCAAATTCTTACCTCTCTCTCAGCTGCAGCTGACTTCAACATGCGTTTCAATGTGTGACATAGCACTAGAGCAGGGATGTCAAACCTTTTTTAGTGGCGGGCCAGTGTGAA 4 1 3' arm Lumbricus_rubellus mirnest 100 100 -35.6 (((((.((.((((.((((((....(((......(((((..((((((.((((((..((.(((....(((.....)))..))).))...)))))).))))))..)))))..)))...)))))).))))..)).)))))... (-35.6)