mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GCGGCAGCGACAGCAGCAGCA TATGCACCTGTCGCCGCCGCTG AGCCAGTCGCTATATGCACCTGTCGCCGCCGCTGCTGTCTCGCCCAGCGGCAGCGACAGCAGCAGCAGCAGCGGCA GTCATCGAGGACGACATCGATGAGGACGAATGGTACATAGTGGAGAAGGAGGATGAGGAGAACGACTCGCTGCCACGCAGCGACTCTGAGGAGGAGCTGACCGTGGCCAGGGCCGCAGCTGGAGCACCAGCTGCTGCTCCTGCAGCTGCGGCGCGTCGTCGCCAGCACATCAATTCGCATTCCTTGTACAGTGGACCACGTCCGCAGCAGCAGCGCAACTACTTGCAGCGCACGCGCGCCGCTGGCCGCACGCTGAGCATCTCCACGCTAAGCCCGCCACGCACTGTGCCAGCCAATGAGCTGGGCAGCGACACGTCGGCTGTCAGCCAGTCGCTATATGCACCTGTCGCCGCCGCTGCTGTCTCGCCCAGCGGCAGCGACAGCAGCAGCAGCAGCGGCAGCTCTGGCGCTGGCCTGCTGATGGAGGAGTCCTGCATGTCGGTTTACCATAGTATTAGGTCCAGCCAGGCGGGCACGGAAAGTTTTGTTAATCTTGATCTCGGCTCAGCGTCGGTGCCAGAACCAGAGCCAGAGCCAGCTCAGCCGGCTGCGGCGGTGCAGCAGCCGCGCAGCCACAGCGCACGCTTCGATCGCCATGCGGCGGCAGAGCTGAAGCAGCAGACGTTGGCTCGTCAAAGCCAGAAGAGCCACAACAAGAAGCAGCATCAGCAGCTGTGCCGCAGCGCCATTAAGCGCGCCAATAAGGTGCGCGACTTCCAGGCCAAGGGTCAGCGTCCGCGCCGCTCGGACATGCAGCACTGCAAGCTGGTCAGCGGTGCCAACACAACCGCAAGTGCTGCTAGTGGATGACACTGTNACATAACCACACAACACACACACGCCTATCTTCATCAGGCTCTTCTACATATCAAAGTAACGCGCTTGGCAGCGCACAGATTTATAGTATTTAATTTGCAAAAAAAAAAAAAAAGGGCGCGCTATACTCAGATGTCTAAGGAGCATTACAGATGCTCTTAACTCGACTGATGACTGATTGAGACTATTGGGAATGA 5 0 3' arm Drosophila_mojavensis mirnest 100 100 -36.9 .(((.((.(((...(((..(((((((.(((((((..((...)).))))))).)))))))..)))..))).))))). (-36.9)