mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TATGGTGGCTTTTTTGAAGAT CTTTCAATGGCCAACCGAGGA GAGAATCCATTTATGGTGGCTTTTTTGAAGATGAAAGCTTTGCTGTAAAGCACAACAAAGAATTTCTTCTTTCAATGGCCAACCGAGGAAAGGATAC CTGCTGCACCGCCCCCGGGGTCGTCCCCTCCCGCCCTCTCCTTCCACTGACGCAGTCCGTGCCGCACCAGCTCTAACATGGCGGCGAGGCGCTGAGGAGCGCGGGGCGACGCGGGCCGCGAGCGGGTATTAAAATTTTCGAAGCCATGGGAGTAAAGGTCCAGAGACCTCGTTGCTTTTTCGACATAGCCATCAACAATGTTCCTGCTGGAAGAGTGGTCTTTGAACTATTTTCTGATGTGTGTCCAAAGACATGTGAGAATTTTCGCTGCCTTTGCACAGGTGAAAAGGGTACAGGAAAATCCACCCAAAAGCCATTGCATTACAAAAGTTGTCTATTTCACAGGGTAGTGAAAGATTTTATGATCCAAGGCGGTGACTTCAGTGAAGGAAATGGCAGGGGAGGAGAATCCATTTATGGTGGCTTTTTTGAAGATGAAAGCTTTGCTGTAAAGCACAACAAAGAATTTCTTCTTTCAATGGCCAACCGAGGAAAGGATACAAATGGTTCACAGTTCTTTATAACTACTAAACCTACACCTCACTTAGATGGACATCATGTTGTTTTTGGACAAGTCATCTCAGGTCAAGAAGTTGTGAGAGAAATAGAAAACCAGAAAACAGATGCATCTAGTAAACCATATGCTGAAGTACGCATACTGAGTTGCGGGGAGTTGATTCCAAAATCCAAAGCCAAGAAAGAAGACAAGAAAAGGCACAAGTCGTCTTCCTCATCCAGCGACTCGGAAAGTTCAAGTGATTCAGAATCGTCTTCTGATTCATCATCAGATTCTGAGAGTGCTTCAGAAGAGAAATCTAAAAAGCGAAAAAAGAAACACAAGAAAAATTCCAAGAAACATAAGAAGGAAAAAGAAAAAGAGAAAGGAAAAGCAGGAAAAGTTCATCTAGTGAAAGTGAAGATGAAAACCCC 4 2 5' arm Meleagris_gallopavo mirnest 100 100 -31.2 ....((((.(((.((((((((..((.(((((.((((.(((((.(((.....))).)))))..)))).))))).)).)))).))))..))).)))).. (-31.2)